Job Description P66817 Confidence 77.16% Date Thu Jan 5 12:10:20 GMT 2012 Rank 114 Aligned Residues 87 % Identity 23% Template c3eagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides Resolution 2.55 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																			.																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	.	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	X	K	H	I	H	I	I	G	I	G	G	T	F	X	G	G	L	A	A	I	A	K	E	A	G	F	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	C	D	A	K	X	Y	P	P	X	S	T	Q	L	E	A	L	G	I	D	V	Y	E	G	F	D	A	A	Q
Template Known Secondary structure										S			S													T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S			T	T								T	T						S			G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
					108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130													.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.				.	.
Query SS confidence		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.				.	.
Query Sequence		.	.	.	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	.	.	.	.	.	.	.	.	.	.	.	.	A	A	V	.	.	T	R	D	M	T	I	V	A	L	T	G	Y	D	G
Query Conservation		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.				.	.
Alig confidence		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation
Template Sequence		L	D	E	F	K	A	D	V	Y	V	I	G	N	V	A	K	R	G	X	D	V	V	E	A	I	L	N	L	G	L	P	Y	I	S	G	P	Q	W	L	S	E	N	V	L	H	H	H	W	V	L	G	V	A	G	T	H	G
Template Known Secondary structure		G	G	S				S						T	T			T	T										T	T														T	G	G	G	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions