 |
Job Description | P66817 | Confidence | 33.27% | Date | Thu Jan 5 12:10:20 GMT 2012 |
Rank | 294 | Aligned Residues | 88 |
% Identity | 20% | Template | c3e0vB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:pyruvate kinase; |
PDBTitle: crystal structure of pyruvate kinase from leishmania mexicana in2 complex with sulphate ions
|
Resolution | 3.30 Å |
|
 |
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
P | D | A | I | S | R | A | A | M | T | L | V | Q | S | L | L | N | G | N | K | I | L | C | C | G | N | G | T | S | A | A | N | A | Q | H | F | A | A | S | M | I | N | R | F | E | T | E | R | P | S | L | P | A | I | A | L | N | T | D | N | V | V | L | T | A | I | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |
|   | . | . | . |
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
D | E | A | V | C | S | S | A | V | N | S | V | Y | E | T | K | A | K | . |
. |
. |
A | M | V | V | L | S | N | T | G | R | S | A | R | L | V | A | K | Y | . |
. |
. |
. |
. |
. |
. |
. |
R | P | N | C | P | I | V | C | V | T | T | R | L | Q | T | C | R | Q | L | N | I | T | Q | G | V | E | S | V | F | F | D | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| . | . | . |
|  |  |  |  |
| S | S | S |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . |
|
| S | S |
|  |  |  |  |  | S |
|  |  |  |  |  |  | T | T | S | S | T | T |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | |
|
|
. | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . |
  |
  |   |
|
|
|
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
. | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
N | D | R | L | H | D | E | V | Y | A | K | Q | V | R | . |
. |
. |
. |
. |
A | L | G | H | A | G | D | V | L | L | A | I | S | T | R | G | N | S |
Query Conservation |   |
. | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |
|
Template Sequence |   |
K | L | G | H | D | W | G | K | E | H | R | V | A | A | G | V | E | F | A | K | S | K | G | Y | V | Q | T | G | D | Y | C | V | V | I | H | A | D | G | Y | A |
Template Known Secondary structure |   |
T | S |
|
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| T | T |
|  |  |  |  |  |  |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
446 | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|