Job Description P66817 Confidence 28.19% Date Thu Jan 5 12:10:20 GMT 2012 Rank 354 Aligned Residues 115 % Identity 15% Template c3c85A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus Resolution 1.90 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	.	.	.	.	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A
Query Conservation																																															.	.	.	.
Alig confidence														.	.	.												.	.	.	.	.															.	.	.	.
Template Conservation														.	.	.												.	.	.	.	.
Template Sequence		G	H	A	Q	V	L	I	L	G	X	G	R	.	.	.	I	G	T	G	A	Y	D	E	L	R	A	.	.	.	.	.	R	Y	G	K	I	S	L	G	I	E	I	R	E	E	A	A	Q	Q	H	R	S	E	G	R	N	V	I	S	G	D	A	T	D	P	D	F	W	E	R	I	L	D	T	G	H	V	K	L	V
Template Known Secondary structure		T	T		S							S		.	.	.												.	.	.	.	.				S							S											T	T								T	T							T	B		S
Template Predicted Secondary structure														.	.	.												.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	.	.	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		L	L	A	X	P	H	H	Q	G	N	Q	T	A	L	E	Q	L	Q	R	R	N	Y	K	G	Q	I	A	A	I	A	E	Y	P	D	Q	L	E	G	L	L	E	S	G	V	D	A	A	F	N
Template Known Secondary structure						S	S														T	T			S							S	S											T		S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions