Job Description P66817 Confidence 31.53% Date Thu Jan 5 12:10:20 GMT 2012 Rank 320 Aligned Residues 105 % Identity 17% Template c3aemD_ PDB info PDB header:lyase Chain: D: PDB Molecule:methionine gamma-lyase; PDBTitle: reaction intermediate structure of entamoeba histolytica methionine2 gamma-lyase 1 containing michaelis complex and methionine imine-3 pyridoxamine-5'-phosphate Resolution 2.20 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.
Query Sequence		R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	.	.	.	.	.	.	.	.	.	R	L	H	D	E	V	Y
Query Conservation																																																																		.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		E	Q	F	E	E	M	V	C	S	I	E	G	A	A	G	S	A	A	F	G	S	G	M	G	A	I	S	S	S	T	L	A	.	.	.	.	.	.	.	.	F	L	Q	K	G	D	H	L	I	A	G	D	T	L	Y	G	C	T	V	S	L	F	T	H	W	L	P	R	F	G	I	E	V	D	L	I	D	T	S	D
Template Known Secondary structure													T		S						S	S										T	T	.	.	.	.	.	.	.	.	T			T	T							S	S																T	T								T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		1562	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.									.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	.	.	.	.	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.
Template Conservation
Template Sequence		V	E	K	V	K	A	A	W	K	P	N	T	K	M	V	Y	L	E	S	P	A	N	P	T	C	K	V	S	D	I	K	G	I	A	V	V	C	H	E	R	G	A	R	L	V	V
Template Known Secondary structure											T	T								S	S		T	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		1634	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions