Job Description P66817 Confidence 21.26% Date Thu Jan 5 12:10:20 GMT 2012 Rank 470 Aligned Residues 147 % Identity 12% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	.	.	.	.	.	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A
Query Conservation																																																					.	.	.	.	.
Alig confidence													.	.	.																																						.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		K	N	R	F	V	I	L	G	F	G	C	.	.	.	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N	D	F	L	I	D
Template Known Secondary structure			S								S		.	.	.													B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	.	.	.	.	.	.	.	.	.	.	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	P	S	H	R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																		.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation															.	.	.																																																			.	.
Template Sequence		V	S	I	G	I	S	S	L	A	L	I	I	L	.	.	.	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T	H	G	A	N	P	G	L	.	.	V	S	H	F	I	K	E	A	L	L	N	I
Template Known Secondary structure				S	S	S									.	.	.					T						S	S																			T	T	T	T	T			S					S		B	T	T	T	B		.	.
Template Predicted Secondary structure															.	.	.																																																			.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.
		186	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	N	T	L	F	P	H	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	D	N	G	L	T	I	N	R
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions