Job Description P66817 Confidence 54.34% Date Thu Jan 5 12:10:20 GMT 2012 Rank 182 Aligned Residues 114 % Identity 14% Template c2o1eB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583 Resolution 2.60 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	C	F	T	E	S	I	Q	T	Q	I	A	A	A	E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V
Query Conservation
Alig confidence																																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		K	E	Y	Y	E	K	N	S	K	E	Y	I	A	K	L	Q	D	L	D	K	L	Y	R	T	T	A	K	K	A	E	.	.	.	.	.	.	K	K	E	F	I	T	Q	H	T	A	F	G	Y	L	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	L	K	Q	V	P	I	A	G	.	.	.	.
Template Known Secondary structure																															S	.	.	.	.	.	.	S						S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							S	S	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.														.	.	.	.	.	.	.	.	210	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G
Query Conservation
Alig confidence		.	.	.																																										.	.
Template Conservation		.	.	.																																										.	.
Template Sequence		.	.	.	L	S	P	D	Q	E	P	S	A	A	S	L	A	K	L	K	T	Y	A	K	E	H	N	V	K	V	I	Y	F	E	E	I	A	S	S	K	V	A	D	T	L	.	.	A	S	E	I	G	A	K	T	E	V	L	N	T	L	E	G
Template Known Secondary structure		.	.	.			S	S	S												T					T	T							S	S											.	.				T										S	S	S
Template Predicted Secondary structure		.	.	.																																										.	.
Template SS confidence
					212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions