Job Description P66817 Confidence 94.77% Date Thu Jan 5 12:10:20 GMT 2012 Rank 74 Aligned Residues 150 % Identity 9% Template c2nyaF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	.	.	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K
Query Conservation																					.	.
Alig confidence																					.	.																															.	.	.
Template Conservation																																																					.	.	.
Template Sequence		D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	.	.	.	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M
Template Known Secondary structure																			T		G	G	G							T	T	S															T	S					.	.	.				G	G	G	G	T	T												S	S		S		S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.																																	.
Query SS confidence																																.	.	.	.																																	.
Query Sequence		Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	.	.	.	.	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	.	P	S	H	R	S	A	R	I	Q	E	M	H	M
Query Conservation																																.	.	.	.																																	.
Alig confidence																																.	.	.	.												.	.	.	.																		.							.	.	.	.
Template Conservation																																															.	.	.	.																									.	.	.	.
Template Sequence		G	C	Y	D	D	I	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	.	.	.	.	S	T	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P	Q	S	D	L	V	.	.	.	.	I	L	N
Template Known Secondary structure				G	G	G	G	G	G		S						S							S													T		T	T							.	.	.	.		S	S	B		T	T	G	G	G		S							T	T	T				.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.																									.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.
		177	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	N	C	L	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	A	N	Y	I	I	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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