Job Description P66817 Confidence 36.54% Date Thu Jan 5 12:10:20 GMT 2012 Rank 268 Aligned Residues 106 % Identity 10% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	.	.	.	.	K	Q	V	R	A	L	G	H	A	G	D	V	L	L
Query Conservation																																																																.	.	.	.
Alig confidence															.	.	.											.	.	.	.	.	.																															.	.	.	.
Template Conservation															.	.	.											.	.	.	.	.	.
Template Sequence		Q	K	S	K	Y	I	V	I	F	G	C	G	R	.	.	.	L	G	S	L	I	A	N	L	A	S	.	.	.	.	.	.	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M
Template Known Secondary structure													S		.	.	.											.	.	.	.	.	.		T	T								S		G	G	G	G	G	G	S		T	T			S					S		T	T	S						T	T	T	G	G	G		S
Template Predicted Secondary structure															.	.	.											.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	.	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		V	F	A	F	T	N	D	D	S	T	N	F	F	I	S	M	N	A	R	Y	M	F	N	V	E	N	V	I	A	R	V	Y	D	P	E	K	I	K	I	F
Template Known Secondary structure						S	S															T	S			S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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