 |
Job Description | P66817 | Confidence | 97.91% | Date | Thu Jan 5 12:10:20 GMT 2012 |
Rank | 40 | Aligned Residues | 124 |
% Identity | 16% | Template | c1zzgB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:glucose-6-phosphate isomerase; |
PDBTitle: crystal structure of hypothetical protein tt0462 from thermus2 thermophilus hb8
|
Resolution | 1.95 Å |
|
 |
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | A | M | T | L | V | Q | S | L | L | N | G | N | K | I | L | C | C | G | N | G | T | S | A | A | N | A | Q | H | F | A | A | S | M | I | N | R | F | E | T | E | R | P | S | L | P | A | I | A | L | N | T | D | N | V | V | L | T | A | I | A | N | D | R | L | H | D | E | V | Y | A | K | Q | V | R | A | L | G | H |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
| . | . | . | . |   |   |   |   |   |   |
|   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
R | E | V | R | R | Y | R | E | A | N | P | W | V | E | D | F | V | L | I | G | I | G | G | S | A | L | G | P | K | A | L | E | A | A | F | . |
. |
. |
. |
N | E | S | G | V | R | F | H | Y | L | D | H | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | E | P | I | L | R | L | L | R | T | L | D | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
| S |
|
|  |  |  |  |  |
| S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | S |
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | D | V | L | L | A | I | S | T | R | G | N | S | R | D | I | V | K | A | V | E | A | A | V | T | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | M | T | I | V | A | L | T | G | Y | D | G | G | E | L | A | G | L | L | G | P | Q | D | V | . |
E | I | R | I | P | S | H | R | S | A | R |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|
|   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   | . |   |
|   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
Template Sequence |   |
R | K | T | L | V | N | A | V | S | K | S | G | S | T | A | E | T | L | A | G | L | A | V | F | L | K | W | L | K | A | H | L | G | E | D | W | R | R | H | L | V | V | T | T | D | P | K | E | G | P | L | R | A | F | A | E | R | E | G | L | K | A | F | A | I | P | K | E | V | G | G | R |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | G | G |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
| T | T |
|
| G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|