Return to main results Retrieve Phyre Job Id

Job DescriptionP24077
Confidence1.54%DateThu Jan 5 11:40:41 GMT 2012
Rank45Aligned Residues101
% Identity8%Templated1xl4a2
SCOP infoVoltage-gated potassium channels Voltage-gated potassium channels Voltage-gated potassium channels
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 












Query SS confidence 















































































Query Sequence  NKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYER
Query Conservation             
     
  
         
       
         
    

      
   
     
 
 

 

Alig confidence 















































































Template Conservation         
 
                         

                    
 


  
 







 
 
  
Template Sequence  EKRGWLDDHYHDLLTVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPL
Template Known Secondary structure 



SS
SSTTS
T
S
STTS
TT
TT


SSS


Template Predicted Secondary structure 

















Template SS confidence 















































































   2930.........40.........50.........60.........70.........80.........90.........100........
 
   82.......90.........100..
Predicted Secondary structure 
Query SS confidence 




















Query Sequence  KKVILLARGTCGIGFIGLCLN
Query Conservation 
  
                 
Alig confidence 




















Template Conservation    
        
    
   
Template Sequence  ANTLVTLEALCGMLGLAVAAS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




















   109110.........120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions