Return to main results Retrieve Phyre Job Id

Job DescriptionQ46797
Confidence8.60%DateThu Jan 5 12:34:17 GMT 2012
Rank83Aligned Residues72
% Identity7%Templatec3pt8B_
PDB info PDB header:oxygen transportChain: B: PDB Molecule:hemoglobin iii; PDBTitle: structure of hbii-iii-cn from lucina pectinata at ph 5.0
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200...... ...210.........220.........230
Predicted Secondary structure 















........






Query SS confidence 















































. . . . . . . .























Query Sequence  AKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSN. . . . . . . . SPVMADVQEEGKPQLWNHKQNDAL
Query Conservation 


 
 

 

 




 









  


 
  
  





  ........
  
 



 



 








Alig confidence 


























..........










........











...








Template Conservation 
  
   
   
  
 
       
  ..........

  
   

    
      
   
   

...       

Template Sequence  SLVFCNGMSSFVDNLDDHEVLVVLLQK. . . . . . . . . . MAKLHFNRGIRIKELRDGYGTLLRYLEDHCH. . . VEGSTKNAW
Template Known Secondary structure  TTTT
..........TTT

TTS...

Template Predicted Secondary structure 


..........





...

Template SS confidence 















































































   67..70.........80.........90... ......100.........110.........120.... .....130...
 
   231........240...
Predicted Secondary structure 
Query SS confidence 












Query Sequence  GLYLDLLIQAINT
Query Conservation 
 


    

  
Alig confidence 












Template Conservation        
   
  
Template Sequence  EDFIAYICRVQGD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 












   134.....140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions