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Job DescriptionQ46797
Confidence94.94%DateThu Jan 5 12:34:17 GMT 2012
Rank4Aligned Residues115
% Identity22%Templatec1lf6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucoamylase; PDBTitle: crystal structure of bacterial glucoamylase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120... ......130.........140.........150.........160.........170.........180.......
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Query Sequence  EKPWGTFILASTF. . . EDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPK
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Template Sequence  KTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAF. IAAGDVDSANRSLDYLAKVVKD. . . . . . . . . . . . . . .
Template Known Secondary structure  SSSTT
B
S
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TTGGGSBSBS

GGGSB
.T
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   311........320.........330.........340.........350.. .......360.........370....
 
   188.190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  RLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALL
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Template Sequence  . . NGMIPQNTWIS. . . . . . . . . . . . . . . . GKPY. WTGIQLDEQADPIILSYRLKRYDLYDSLV. . . KPLADFIIKI
Template Known Secondary structure  ..SS

S
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TT................S
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GGGTTTT...
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   375....380..... .... 390.........400.........410........ .420........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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