Job Description P08244 Confidence 98.89% Date Thu Jan 5 11:01:00 GMT 2012 Rank 59 Aligned Residues 191 % Identity 16% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.									.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																						.														.													.	.	.	.	.	.	.	.
Query SS confidence																						.														.													.	.	.	.	.	.	.	.
Query Sequence		L	T	A	S	S	S	S	R	A	V	T	N	S	P	V	V	V	A	L	D	.	Y	H	N	R	D	D	A	L	A	F	V	D	K	.	I	D	P	R	D	C	R	L	K	V	G	K	.	.	.	.	.	.	.	.	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	R	G	F	D	I	F	L	D	L
Query Conservation																						.														.													.	.	.	.	.	.	.	.
Alig confidence																						.														.													.	.	.	.	.	.	.	.																								.	.
Template Conservation																																																																																.	.
Template Sequence		M	T	R	I	S	R	E	M	M	K	E	L	L	S	V	Y	F	I	M	G	S	N	N	T	K	A	D	P	V	T	V	V	Q	K	A	L	K	G	G	A	T	L	Y	Q	F	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A	A	C	R	E	A	G	V	P	F	I	V	.	.
Template Known Secondary structure		S	S											T	T							G	G	G		S	S													T		S								S	T	T																						T						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.																								.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																		.	.	.	.																								.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	D	D	V	E	L	A	L	N	L	K	A	D	G	I	H	I	.	.	.	.	G	Q	E	D	A	N	A	K	E	V	R	A	A	I	G	D	M	I	L	G	V	S	A	.	.	.	.	.	.	.	H	T	M	S	E	V	K	Q	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S									T		S					.	.	.	.		T	T	S	S										T	T	S							.	.	.	.	.	.	.		S							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.	.	.	.																								.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.																	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	A	A	L	T	Q	K	C	G	L	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	C	S	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	V	D
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	E	E	D	G	A	D	Y	V	G	L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G	I	.	.	.	.	.	.	.	.	.	.	.	G	G	I	T	I	D	N	A	A	P	V	I	Q	A	G	A	D
Template Known Secondary structure		.	.	.	.	.					T		S							S	S				S	S	S	S						T	T									T	T									.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	T	S						T	T		S
Template Predicted Secondary structure		.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	V	I	G	R	P	V	T	Q	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	S	M	I	S	A	I	S	Q	A	E	D	P	E	S	A	A	R	K	F	R	E	E	I	Q	T
Template Known Secondary structure						S					T	S	S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions