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Job DescriptionP08244
Confidence100.00%DateThu Jan 5 11:01:00 GMT 2012
Rank18Aligned Residues228
% Identity19%Templated2ffca1
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.... .....30.
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Query Sequence  SSRAVTNSPVVVALDYH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NRDDALA
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Template Sequence  KRRDEVNTCLCIGLDPDEADIKSFMQSEKQNGYQSVKKNLSNSGELFAPQMGGQMLLATPPKEAQEKDEFFYFFNHFCFY
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   32.......40.........50.........60.... .....70.........80.........90 .........100...
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Query Sequence  FVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQR. . . . . . . GFDIFLDLKFHDIPNTAAHAVAAAAD. LGVWMVNVHASGG
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Template Sequence  IINETKEYALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHLNVPTILDIKMNDIGNTVKHYRKFIFDYLRSDSCTANIYMG
Template Known Secondary structure  GGG
SGGGGSTTTT




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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   104.....110. ........120.........130.........140.........150.........160 .........
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Query Sequence  ARMMTAAR. EALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQK. . . . . . . . . . CGLDGVVCS. . .
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Template Sequence  TQMLRDICLDEECKRYYS. . . . TFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQLHLEENGEFVGFVVGANC
Template Known Secondary structure  STTB
TTS

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SSTTTTT
TTTTTGGGT


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   201........210........ .220.........230.........240.........250.........260.........270......
 
   170.........180.........190.........200.........210......... 220.........230.........240....
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Query Sequence  AQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMV. IGRPVTQSVDPAQTLKAINASLQRS
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Template Sequence  YDEIKKIRELFPDCY. ILAPGVGAQ. . . . KGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKEV
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   277..280.........290. ........300 .........310.........320.........330.........340.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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