Job Description P08244 Confidence 69.68% Date Thu Jan 5 11:01:00 GMT 2012 Rank 210 Aligned Residues 213 % Identity 13% Template d2b4ga1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.95

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																							.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	T	A	S	S	S	S	R	A	V	T	N	S	P	V	V	V	A	L	.	D	Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	M	F	T	L	F	G	P	Q	F	V
Query Conservation																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		S	L	K	V	N	I	L	G	H	E	F	S	N	.	P	F	M	N	A	A	G	V	L	C	T	T	E	E	D	L	R	R	M	T	E	S	E	S	G	S	L	I	G	K	S	C	T	L	A	P	R	T	G	N	P	E	P	R	Y	F	G	L	P	L	G	S	I	N	S	M	G	L	P	N	L	G	V	D	F	Y
Template Known Secondary structure								T	T				S	S	.	S					T	T	S	S		S	S										S	S		S									S	S		B			S		S							T	T										B	S
Template Predicted Secondary structure															.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		59	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure							.	.	.	.	.																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	L	Q	Q	.	.	.	.	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	.	.	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	.	.	.	.	.	.	.	.	.	.	.	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D
Query Conservation							.	.	.	.	.																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																						.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	Y	A	A	Q	T	H	D	Y	S	R	K	P	L	F	L	S	M	S	G	L	S	V	E	E	S	V	E	M	V	K	K	L	V	P	I	T	K	E	K	G	T	I	L	E	L	N	L	S	C	P	N	V	P	G	K	P	Q	V	G	Y	D	F	D	T	T	R	T	Y	L	Q	K	V	S	E	A	Y	G	L
Template Known Secondary structure								T			T	T	T										S	S																															S	T	T				G	G	G																		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	G	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	P	Y	F	D	I	A	H	F	D	M	A	A	A	V	L	N	D	F	P	L	V	K	F	I	T	C	V	N	S	I	G	N	G	L	V	I	D	P	A	N	E	T	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	K	Y
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T		T	T																		T	T	T	T			S			G	G	G	G							G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.																.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																							.
Query SS confidence		.	.	.	.	.																																																							.
Query Sequence		.	.	.	.	.	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	.	V	T	Q	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R
Query Conservation		.	.	.	.	.																																																							.
Alig confidence		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.																					.							.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Sequence		V	L	P	T	A	L	A	N	V	N	A	F	F	R	R	C	P	D	K	L	V	F	G	C	G	G	V	Y	S	.	.	.	.	.	.	.	.	.	.	G	E	E	A	F	L	H	I	L	A	G	A	S	M	V	Q	V	G	T	A	L	H	D	E	G	P	I	.	.	.	I	F	A	R	L	N	K	E	L	Q	E
Template Known Secondary structure		G																T	T	S						S	S			S	.	.	.	.	.	.	.	.	.	.											T							S								T	T	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																												.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.											.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions