Job Description P08244 Confidence 95.93% Date Thu Jan 5 11:01:00 GMT 2012 Rank 119 Aligned Residues 173 % Identity 16% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		55	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.																																					.
Query SS confidence											.																																					.
Query Sequence		P	Q	F	V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	.	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S
Query Conservation											.																																					.
Alig confidence											.																																					.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	.	.	.	.	.	.	.	.	.	.	.	V	P	L	I	G	H
Template Known Secondary structure													S	S												G	G	G												T																								S	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.												.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	.	.	.	.	.	.	.	.	.	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																			.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																					.	.																																									.	.	.	.
Template Sequence		F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	.	.	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	.	.	.	.	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S
Template Known Secondary structure			T	T	T						S	T	T	S	S						.	.									T		S							S	S	T	T	S	S	S														S			.	.	.	.	T	T											S	B
Template Predicted Secondary structure																					.	.																																									.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		204	.	.	.	.	.	210	.	.		.	.		.	.	.	.	.		220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure											.			.						.											.
Query SS confidence											.			.						.											.
Query Sequence		I	M	T	P	E	Q	A	L	S	.	A	G	.	V	D	Y	M	V	.	I	G	R	P	V	T	Q	S	V	D	.	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R	S
Query Conservation											.			.						.											.
Alig confidence											.			.						.											.
Template Conservation
Template Sequence		A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K	A	G	A	K	S	I	R	Q	A	W	E	A	I
Template Known Secondary structure		T	T	T										S	S		S				B	S	S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions