Job Description P08244 Confidence 71.98% Date Thu Jan 5 11:01:00 GMT 2012 Rank 208 Aligned Residues 214 % Identity 16% Template d1vcfa1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.60

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.		.
Predicted Secondary structure																			.																																													.	.	.	.													.
Query SS confidence																			.																																													.	.	.	.													.
Query Sequence		L	T	A	S	S	S	S	R	A	V	T	N	S	P	V	V	V	.	A	L	D	Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	.	.	.	.	R	G	F	D	I	F	L	D	L	K	F	H	.	D
Query Conservation																			.																																													.	.	.	.													.
Alig confidence														.					.																																													.	.	.	.													.
Template Conservation														.
Template Sequence		L	T	T	P	F	L	G	K	T	L	K	A	.	P	F	L	I	G	A	X	T	E	N	G	E	R	I	N	L	A	L	A	E	A	A	E	A	L	G	V	G	X	X	L	G	S	G	R	I	L	L	E	R	P	E	A	L	R	S	F	R	V	R	K	V	A	P	K	A	L	L	I	A	N	L	G	L	A	Q	L
Template Known Secondary structure							T	T				S	S	.	S																									T															T	T	T							T	T	T		S	S	S								G	G	G	G
Template Predicted Secondary structure														.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	.	.	.	.	.	.	.	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	R	Y	G	R	D	D	L	L	R	L	V	E	X	L	E	A	D	A	L	A	F	H	V	N	P	L	Q	E	A	V	Q	R	G	D	T	D	F	R	G	L	V	E	R	L	A	E	L	L	P	L	P	F	P	V	X	V	K	E	V	G	H	G	L	S	R	E	A	A	L	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	T														T		S														T	T	S					T	T										S		S	S							S	S	S										.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	R	D	L	P	L	A	A	V	D	V	A	G	A	G	G	T	S	W	A	R	V	E	E	W	V	E	L	C	E	I	G	I	P	T	A	R	A	I	L	E	V	R	E	V	L	P	H	L	P	L	V	A	S	G	G	V	Y	T	G	T	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.		T	T	S			S							B	T	S									T				T	T		S		B													S	S	S						S	S			S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
										201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	V	.	.	.	.	.	T	Q	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R	S
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.
Template Conservation
Template Sequence		G	A	K	A	L	A	L	G	A	D	L	L	A	V	A	R	P	L	L	R	P	A	L	E	G	A	E	R	V	A	A	W	I	G	D	Y	L	E	E	L	R	T	A
Template Known Secondary structure									T		S						G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions