Job Description P08244 Confidence 98.67% Date Thu Jan 5 11:01:00 GMT 2012 Rank 67 Aligned Residues 207 % Identity 17% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																					.	.
Predicted Secondary structure																				.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	L	T	A	S	S	S	S	R	A	V	T	N	S	P	V	V	.	.	.	V	A	L	D	Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F
Query Conservation																				.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.
Template Sequence		M	T	T	L	E	A	F	A	K	A	R	S	E	G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	Y	A	D	L	L	E	I	G	L	P	Y	S	.	.	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E	L
Template Known Secondary structure														T	T	B									T	T	S	S													G	G	G		S	S									.	.															T	T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		58	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure								.																		.
Query SS confidence								.																		.
Query Sequence		V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	.	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A
Query Conservation								.																		.
Alig confidence								.																		.																			.																				.	.	.	.	.	.
Template Conservation																																													.																				.	.	.	.	.	.
Template Sequence		V	R	E	V	R	A	L	T	E	K	P	L	F	L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	.	P	D	L	P	P	D	E	D	P	G	L	V	R	L	A	Q	E	I	G	.	.	.	.	.	.	L	E	T	V	F	L	L	A	P	T	S
Template Known Secondary structure											S																											T							.	T	T			G	G	G												T	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																													.																				.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																				.	.																																												.
Query SS confidence																																				.	.																																												.
Query Sequence		S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	.	.	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	.
Query Conservation																																				.	.																																												.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.													.	.									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.													.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	.	.	.	.	.	.	.	D	A	R	I	A	T	V	V	R	H	A	T	.	.	G	F	V	Y	A	V	S	V	E	V	K	D	L	V	R	R	I	K	A	R	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	V	A	V	G	F	G	V	S	G	K	A	T	A	A	Q	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.									T	T			.	.	S																		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S				S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.													.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156												.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190															.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		A	G	V	D	Y	M	V	I	G	R	P	V	T	.	.	.	.	Q	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	E	G	R	S	L	A	P	L	L	Q	E	I	R	Q	G	L	Q	R
Template Known Secondary structure		T	T	S	S														T	T															B
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions