Job Description P08244 Confidence 99.20% Date Thu Jan 5 11:01:00 GMT 2012 Rank 48 Aligned Residues 206 % Identity 15% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		5	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.																							50	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	S	S	S	R	A	V	T	N	S	P	.	.	.	.	V	V	V	A	L	D	Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	.	D	C	R	L	K	V	G	K	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	L	F	G	P	Q	F
Query Conservation														.	.	.	.																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	T	M	A	A	L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E	M
Template Known Secondary structure											T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		58	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S
Query Conservation								.
Alig confidence								.								.	.	.																																	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.																																	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	E	V	T	P	E	L	S	C	P	V	V	L	.	.	.	L	S	Y	Y	K	P	I	M	F	R	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	L	P	Y	V	A	.	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	L	L	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						G	G	G		S	S					.	.	.				S					S			T						T	T							T	T			T	T	T	.											T	T								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.																																	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.													.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	.	R
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation		.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	P	A	I	P	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	G	F	G	I	S	K
Template Known Secondary structure		.	.	.	.	.	.		T	T	S														S							S	S			B		T	T	S		B		T														S	S		.	.	.	.	.	.	.	.	.	.	.	.					S				S
Template Predicted Secondary structure		.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.													.	.	.	.	.	.	210	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		I	M	T	P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	V	T	.	.	.	.	Q	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G
Template Known Secondary structure											T	T		S														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions