Job Description P08244 Confidence 98.96% Date Thu Jan 5 11:01:00 GMT 2012 Rank 55 Aligned Residues 176 % Identity 12% Template d1piia2 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																												.																	.								.																												.
Query SS confidence																												.																	.								.																												.
Query Sequence		D	Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	.	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	.	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	.
Query Conservation																												.																	.								.																												.
Alig confidence																												.																	.								.						.	.	.	.	.	.																	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		V	I	R	D	D	F	D	P	A	R	I	A	A	I	Y	K	H	Y	A	S	A	I	S	V	L	T	D	E	K	Y	F	Q	G	S	F	N	F	L	P	I	V	S	Q	I	A	P	Q	P	I	L	C	K	D	F	I	I	D	.	.	.	.	.	.	P	Y	Q	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L
Template Known Secondary structure			S		S	S											T	T	T		S								S	T	T	T				T	T											S						S				S	.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	.	.	.	.	.	.	.	S	N	E	E	E	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S
Template Known Secondary structure			T	T	T																T	T								.	.	.	.	.	.	.		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		S						S			T	T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.																		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	V	T	Q	S	V	D	P	A	Q	T	L	K	A	I
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	.	.	.	.	.	.	.	.	.	.	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R	R	V
Template Known Secondary structure				T												T	T	S					.	.	.	.	.	.	.	.	.	.		S												T	T	T		S										T		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.											.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions