Job Description P08244 Confidence 24.04% Date Thu Jan 5 11:01:00 GMT 2012 Rank 317 Aligned Residues 152 % Identity 8% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	R	G	F	D	I	F	L	D	L	K	F	.	.	.	.	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.
Template Conservation
Template Sequence		L	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	S	G	K	P	V	A	A	T	M	A	I	G	P	E	G	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	G	A	S	I	I	G	V	N	C	H	F	D	P
Template Known Secondary structure											T	T		S								S													G	G	G	S	S									B	T	T	B	S	T	T	S													T	T		S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.														.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	.	.	.	.	V
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		T	I	S	L	K	T	V	K	L	M	K	E	G	L	E	A	A	Q	L	K	A	H	L	M	S	Q	P	L	A	Y	H	T	P	D	A	N	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	Y	I	G	G	C	C	G
Template Known Secondary structure																		T	T											S	B			T	T			T	T		G	G	G	S	T	T	T	T	T	S		G	G	G	B																	T								T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		168	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	A	Q	E	A	V	R	F	K	Q	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	P	Y	H	I	R	A	I	A	E	E	L
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions