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Job DescriptionP08244
Confidence100.00%DateThu Jan 5 11:01:00 GMT 2012
Rank12Aligned Residues210
% Identity25%Templated1km4a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60... ......70.........80.........90..
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Query Sequence  NSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQ. RGFDIFLDLKFHDIPNTAAHAVAAAADLG
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Template Sequence  MNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFAVADIPETNEKICRATFKAG
Template Known Secondary structure  GGG

SSTTT
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  VWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQE
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Template Sequence  ADAIIVHGFPGADSVRACLNVAEEMGREVFLL. . . . . . . . TEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPER
Template Known Secondary structure 
SSTT
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SSGGGGTTT



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   92.......100.........110.........120... ......130.........140.........150.........160...
 
   173......180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASL
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Template Sequence  LSRLREIIGQDSFLISPGVGAQGGD. . . . . . . . . . PGETLRFADAIIVGRSIYLADNPAAAAAGIIESI
Template Known Secondary structure 
SSS

BSTTSB
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   164.....170.........180........ .190.........200.........210.........220..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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