Job Description P08244 Confidence 99.03% Date Thu Jan 5 11:01:00 GMT 2012 Rank 52 Aligned Residues 194 % Identity 14% Template d1geqa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																							50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		V	A	L	D	Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	F	H
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		L	T	A	G	D	P	D	K	Q	S	T	L	N	F	L	L	A	L	D	E	Y	A	G	A	I	E	L	G	I	P	F	S	D	P	I	A	D	G	K	T	I	Q	E	S	H	Y	R	A	L	K	N	G	F	K	L	R	E	A	F	W	I	V	K	E	F	R	R	H	S	S	T	P	I	V	L	M	T	Y	Y	N
Template Known Secondary structure				T	T	S	S													G	G	G	B	S									S			T	T	S														T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		76	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		D	I	.	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L
Query Conservation				.
Alig confidence				.																													.													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	Y	R	A	G	V	R	N	F	L	A	E	A	K	A	S	G	V	D	G	I	L	V	V	D	L	P	V	F	H	.	A	K	E	F	T	E	I	A	R	E	E	G	.	.	.	.	I	K	T	V	F	L	A	A	P	N	T	P	D	E	R	L	K	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T							T	T			G	G	G	.												T	.	.	.	.									T	T										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																																																								.
Query SS confidence																			.	.	.	.	.	.	.																																																								.
Query Sequence		A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	.	.	.	.	.	.	.	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	V	T	Q	.
Query Conservation																			.	.	.	.	.	.	.																																																								.
Alig confidence		.	.																.	.	.	.	.	.	.										.													.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.																																.													.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	D	M	T	T	G	F	V	Y	L	V	S	L	Y	E	I	P	K	T	A	Y	D	L	L	R	R	A	K	R	I	C	.	R	N	K	V	A	V	G	F	G	V	S	K	.	.	.	.	.	.	.	.	.	.	R	E	H	V	V	S	L	L	K	E	G	A	N	G	V	V	V	G	S	A	L	V	K	I
Template Known Secondary structure		.	.					S	S																										.	S	S						S				S	.	.	.	.	.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure		.	.																																.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
			227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		I	G	E	K	G	R	E	A	T	E	F	L	K	K	K	V	E	E
Template Known Secondary structure						G	G	G
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions