Job Description P08244 Confidence 95.38% Date Thu Jan 5 11:01:00 GMT 2012 Rank 126 Aligned Residues 180 % Identity 16% Template d1geha1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.80

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		55	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.																																								.
Query SS confidence											.																																								.
Query Sequence		P	Q	F	V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	.	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S
Query Conservation											.																																								.
Alig confidence											.																																								.																	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		A	K	I	I	D	K	V	E	N	E	T	G	E	K	K	T	W	F	A	N	I	T	A	D	L	L	E	M	E	Q	R	L	E	V	L	A	D	L	G	L	K	H	A	M	V	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	.	.	.	.	.	.	L	A	I	H	G	H	R	A
Template Known Secondary structure												T		S							B			S	S															T																										T	T	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	.	.	.	.	.	.	.	.	.	E	A	V	R	F	K	Q	V	F	G	Q	E	.	.	.	.	.	.	.	F	K	L	V	T	P	G	I	R	P	Q	G	S
Query Conservation																																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence																	.											.	.	.											.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																	.											.	.	.
Template Sequence		M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M	.	F	V	L	A	K	L	Y	R	L	I	.	.	.	G	I	D	Q	L	H	V	G	T	A	E	G	G	K	W	D	V	I	Q	N	A	R	I	L	R	E	S	H	Y	K	P	D	E	N	D	V	F	H	L	E	Q	K	F	Y	S	I	K	A	A	F	P
Template Known Secondary structure		T	G	G	G	T	S	S		T	T	S	S				.											.	.	.	T		S									T															S						T	T			S							T	T
Template Predicted Secondary structure																	.											.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																		.									.										.
Query SS confidence																		.									.										.
Query Sequence		E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	.	A	G	V	D	Y	M	V	I	.	G	R	P	V	T	Q	S	V	D	.	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R	S
Query Conservation																		.									.										.
Alig confidence																		.									.										.
Template Conservation
Template Sequence		T	S	S	G	G	L	H	P	G	N	I	Q	P	V	I	E	A	L	G	T	D	I	V	L	Q	L	G	G	G	T	L	G	H	P	D	G	P	A	A	G	A	R	A	V	R	Q	A	I	D	A	I
Template Known Secondary structure					S	S			T	T	T								T		S	S	S					S					S		T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions