Return to main results Retrieve Phyre Job Id

Job DescriptionP08244
Confidence100.00%DateThu Jan 5 11:01:00 GMT 2012
Rank2Aligned Residues232
% Identity39%Templated1dbta_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  VTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADL
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Template Sequence  MKNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASL
Template Known Secondary structure 


SS



SSTGGGTTS


TTT

S
TT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   92.......100.........110.........120... ......130.........140 .........150.........160.......
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Query Sequence  GVWMVNVHASGGARMMTAAREALVPFGKDAPL. . . LIAVTVLTSMEASDLVD. LGMTLSPADYAERLAALTQKCGLDGVV
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Template Sequence  GVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVV
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SGGG
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   168.170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  CSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQR
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Template Sequence  CSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEG
Template Known Secondary structure 

GGGTTTS
TT


B

TTS

TT
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B
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S
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T
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   161........170.........180.........190.........200.........210.........220.........230......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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