Job Description P08244 Confidence 100.00% Date Thu Jan 5 11:01:00 GMT 2012 Rank 23 Aligned Residues 229 % Identity 14% Template c3r89A_ PDB info PDB header:lyase Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5-phosphate decarboxylase from2 anaerococcus prevotii dsm 20548 Resolution 1.84 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		S	S	S	S	R	A	V	T	N	S	P	V	V	V	A	L	D	Y	H	N	R	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	.	.	.	.	.	.	.	Q	F	V	R	E
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence																			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		K	L	Y	E	K	V	S	K	N	G	F	V	C	I	G	L	D	.	S	S	I	D	Y	I	P	E	N	X	K	A	G	K	S	V	S	E	A	L	F	S	Y	N	K	E	I	I	D	Q	T	Y	D	V	C	A	I	Y	K	L	Q	I	A	Y	Y	E	S	Y	G	I	E	G	X	I	A	Y	R	D	T	L	S	Y
Template Known Secondary structure												S							.			G	G	G	S						T	T																			T	T	S		S											T	T
Template Predicted Secondary structure																			.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		L	Q	Q	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	.	.	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L
Query Conservation																																.	.
Alig confidence																																.	.																																.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		L	R	E	K	D	L	L	S	I	G	D	V	K	R	S	D	I	A	A	S	A	K	X	Y	A	K	A	H	F	E	G	D	F	E	T	D	F	I	T	L	N	P	Y	X	G	X	D	S	I	E	P	Y	E	E	Y	I	E	K	G	D	K	G	V	.	.	.	F	V	L	L	R	T	S	N	P	G	A	K	D	F
Template Known Secondary structure					T	T																									S	G	G	G			S							T	T		G	G	G	T	G	G	G						T	T	S				.	.	.								S	G	G	G	G	T	T
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.
		139	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																	.	.	.	.	.	.								.	.	.
Query SS confidence									.	.																	.	.	.	.	.	.								.	.	.
Query Sequence		V	D	L	G	M	T	L	.	.	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	.	.	.	.	.	.	G	L	D	G	V	V	C	.	.	.	S	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P
Query Conservation									.	.																	.	.	.	.	.	.								.	.	.
Alig confidence									.	.																	.	.	.	.	.	.								.	.	.																		.
Template Conservation																																																												.
Template Sequence		E	V	L	P	V	D	G	E	E	F	F	Y	K	V	G	D	K	X	R	E	L	N	E	K	Y	I	G	K	S	G	F	G	P	I	G	L	V	V	G	A	T	H	S	E	E	V	E	K	I	R	K	R	Y	D	K	X	F	F	.	L	I	P	G	F	G	A	Q	K	A	D	S	X	N	V	Y	K	L	L	E	G
Template Known Secondary structure		T	T				T	T			T													G	G	G			T	T	S																							T	T	T				.							S	S									T	T		B	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	V	T	Q	S	.	.	.	.	.	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R	S
Query Conservation																						.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	N	G	G	V	V	N	S	S	R	A	I	L	K	N	W	Q	N	Y	E	D	G	S	E	K	V	G	Y	Y	A	R	K	K	A	I	E	T
Template Known Secondary structure		.	.	.	.	.	T	B	S											T	G	G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions