Job Description P08244 Confidence 100.00% Date Thu Jan 5 11:01:00 GMT 2012 Rank 14 Aligned Residues 225 % Identity 23% Template c3qw4B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:ump synthase; PDBTitle: structure of leishmania donovani ump synthase Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		M	T	L	T	A	S	S	S	S	R	A	V	T	N	S	P	V	V	V	A	L	D	Y	H	N	.	.	.	.	.	.	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	.	.	.	.	.	.	R	G	F	D	I
Query Conservation																											.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence													.														.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation													.
Template Sequence		M	S	F	F	D	L	L	N	E	R	A	.	K	R	S	L	L	C	V	G	L	D	P	R	A	K	T	A	A	A	A	V	E	E	C	K	R	L	I	E	Q	T	H	E	Y	A	A	A	Y	K	P	N	A	A	F	F	E	F	F	G	A	E	G	W	A	A	L	S	E	V	I	R	A	V	P	A	G	I	P	V
Template Known Secondary structure												T	.	T	T												S	S																G	G	G		S					B						T	T														T	S		T	T	S		B
Template Predicted Secondary structure													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																								.																																																									.
Query SS confidence																								.																																																									.
Query Sequence		F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	.	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	.
Query Conservation																								.																																																									.
Alig confidence																								.																												.	.	.	.	.	.	.																							.
Template Conservation																																																				.	.	.	.	.	.	.
Template Sequence		V	L	D	A	K	R	G	D	I	A	D	T	A	D	A	Y	A	T	S	A	F	K	H	L	N	A	H	A	I	T	A	S	P	Y	M	G	S	D	S	L	Q	P	F	M	R	Y	P	D	K	A	.	.	.	.	.	.	.	V	F	V	L	C	K	T	S	N	K	G	S	N	D	L	Q	C	L	R	V	G	D	R
Template Known Secondary structure																							T	T	S			S						S	T	T										T		T	T	S		.	.	.	.	.	.	.								S	S	G	G	G	G	G	T	T	T	S			T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
				147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.																										.	.	.																																														.	.	.	.	.
Query SS confidence		.	.																										.	.	.																																														.	.	.	.	.
Query Sequence		.	.	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	.	.	.	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	V	D	.	.	.	.	.
Query Conservation		.	.																										.	.	.																																														.	.	.	.	.
Alig confidence		.	.																										.	.	.																	.										.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																																.										.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	Y	E	A	V	A	E	R	A	E	G	P	W	N	V	N	G	N	V	G	L	V	V	G	A	T	D	P	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	.	P	G	I	G	A	Q	G	G	S	.	.	.	.	.	.	.	.	.	L	K	A	S	L	D	A	G	L	R	A	D	G	S	G
Template Known Secondary structure												T	T	T	T		T	T	S								T	T													S	S						.			S	S	T	T				.	.	.	.	.	.	.	.	.											T	T	S
Template Predicted Secondary structure																																																.										.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.										.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
			217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Y	M	V	I	G	R	P	V	T	Q	S	V	D	P	A	Q	T	L	K	A	I	N	A	S	L	Q	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		M	L	I	N	V	S	R	G	L	A	R	A	A	D	P	R	A	A	A	K	E	L	C	E	E	I	N	A
Template Known Secondary structure							S					S		S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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