Job Description P08244 Confidence 51.89% Date Thu Jan 5 11:01:00 GMT 2012 Rank 241 Aligned Residues 84 % Identity 17% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		Y	H	N	R	D	D	A	L	A	F	V	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S
Query Conservation																																											.
Alig confidence																												.	.														.								.	.	.			.	.
Template Conservation																												.	.																						.	.	.			.	.
Template Sequence		I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	.	.	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	.	.	.	L	T	.	.	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M	K	P	F
Template Known Secondary structure					G	G	G											S						S	S		S	.	.	S	S																				.	.	.			.	.		T	T		S	S								T	T								S
Template Predicted Secondary structure																												.	.																						.	.	.			.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	R	M	M	T	A	A	R	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	K	E	L	V	A	R	V	R	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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