Job Description P08244 Confidence 93.48% Date Thu Jan 5 11:01:00 GMT 2012 Rank 140 Aligned Residues 137 % Identity 20% Template c3l0gD_ PDB info PDB header:transferase Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution Resolution 2.05 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.														.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	V	R	E	L	Q	Q	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																.	.	.
Template Sequence		Q	F	V	D	E	V	S	G	T	K	V	K	I	R	S	T	R	K	T	T	.	.	P	G	L	R	M	L	D	K	Y	S	V	C	I	G	G	.	.	.	G	E	S	Y	R	D	N	L	C	D	G	V	L	I	K	D	N	H	I	A	S	C	G	S	I	T	L	A	I	Q	R	L	R	K	N	L	K	N	E	Y
Template Known Secondary structure							T	T	T	S	S							S				.	.	T	T												T	T	.	.	.		B		S		S	S	T	T	S													S													S	T	T
Template Predicted Secondary structure																						.	.																.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	.	.	.	C	S	A	Q	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G
Query Conservation																																															.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	I	E	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	S	Q	V	E	E	S	L	S	N	N	V	D	M	I	L	L	D	N	M	S	I	S	E	I	K	K	A	V	D	I	V	N	G	K	S	V	L	.	.	.	.	.	.	.	.	.	.	E	V	S
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T		S						S														T	T	S	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.																							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.											.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	G	R	P	V	T	Q	S	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	V	N	I	R	N	V	R	N	I	A	L	T	G	V	D	Y	I	S	I	G	C	I	T	N	S	F	Q	N
Template Known Secondary structure		S				T	T	T							T	T		S					G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions