Job Description P08244 Confidence 26.54% Date Thu Jan 5 11:01:00 GMT 2012 Rank 303 Aligned Residues 141 % Identity 15% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		76	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	P	N	T	A	A	H	A	.	.	.	V	A	A	A	A	D	L	G	V	W	M	V	N	V	H	A	S	G	G	A	R	M	M	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A
Query Conservation											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	D	D	L	R	R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C
Template Known Secondary structure																					T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	K	C	G	L	D	G	V	V	C	S	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.														.																																								.	.	.	.	.	.
Template Sequence		R	I	T	V	E	E	E	I	D	G	G	I	T	.	.	.	.	.	.	.	.	R	E	D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	T	T	.	.	.	.	.	.
Template Known Secondary structure					S				S	T	T	S			.	.	.	.	.	.	.	.												T	T	.	S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G		S	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.														.																																								.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	R	I	M	T	P	E	Q	A	L	S	A	G	.	V	D	Y	M	V	I	G	R	P	V	T	Q	S	V	D	P	A	Q	T	L	K	A
Query Conservation																													.
Alig confidence		.	.	.	.	.																							.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	P	V	V	G	V	G	R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I	A	D	P	F	L	P	N	K	I	R	D
Template Known Secondary structure		.	.	.	.	.	S						S														T	T	S		S					S							T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions