Job Description P08244 Confidence 79.87% Date Thu Jan 5 11:01:00 GMT 2012 Rank 189 Aligned Residues 215 % Identity 12% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.
Predicted Secondary structure																.																															.	.																												.	.
Query SS confidence																.																															.	.																												.	.
Query Sequence		A	L	D	Y	H	N	R	D	D	A	L	A	F	V	.	D	K	I	D	P	R	D	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	Q	F	V	R	E	L	Q	Q	.	.	R	G	F	D	I	F	L	D	L	K	F	H	D	I	P	N	T	A	A	H	A	V	A	A	A	A	D	.	.	L	G	V	W
Query Conservation																.																															.	.																												.	.
Alig confidence																.																															.	.													.															.	.
Template Conservation																																																													.
Template Sequence		L	V	N	E	K	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	.	I	D	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	K	S
Template Known Secondary structure					T	T															T	T		S									T	T	S															T						T	S				.				S													S	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		95	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																																																																.	.	.	.	.
Query SS confidence				.																																																																.	.	.	.	.
Query Sequence		M	V	.	N	V	H	A	S	G	G	A	R	M	M	T	A	A	R	E	A	L	V	P	F	G	K	D	A	P	L	L	I	A	V	T	V	L	T	S	M	E	A	S	D	L	V	D	L	G	M	T	L	S	P	A	D	Y	A	E	R	L	A	A	L	T	Q	.	.	.	.	.	K	C	G	L	D	G	V	V	C
Query Conservation				.																																																																.	.	.	.	.
Alig confidence				.																						.	.																																									.	.	.	.	.
Template Conservation																										.	.
Template Sequence		I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	.	.	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T
Template Known Secondary structure								S	T	T																.	.	T							S			T	T					S																			T				G	G	G											S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.			.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
		169	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.																			.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.																			.
Query Sequence		S	A	Q	E	.	.	.	.	.	.	.	.	.	.	.	A	V	R	F	K	Q	V	F	G	Q	E	F	K	L	V	T	P	G	I	R	P	Q	G	S	E	A	G	D	Q	R	.	.	.	.	.	.	.	.	R	I	M	T	P	E	Q	A	L	S	A	G	V	D	Y	M	V	I	.	G	R	P	V	T	Q	S	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.																			.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																.	.	.	.												.	.	.	.	.	.	.	.																			.
Template Conservation																																.	.	.	.
Template Sequence		G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	.	.	.	.	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V	N	P	G	S	V	L	Y	S	D
Template Known Secondary structure		S		G	G	G	T	T																S	T	T						.	.	.	.	B	G	G	G	G	G	G	G	G	T	T																			T	T													G	G	G
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.					.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	Q	T	L	K	A	I	N	A	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	A	D	T	L	E	K	I	E	D	V	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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