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Job DescriptionP08244
Confidence99.94%DateThu Jan 5 11:01:00 GMT 2012
Rank34Aligned Residues212
% Identity13%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30........ .40.........50.........60.........70.........80........
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Query Sequence  VTNSPVVVALDYHNRDDALAFVDKIDP. . . RDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAA
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Template Sequence  IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLM. . VKPVDALIESF
Template Known Secondary structure 
BGGGS
GGGTT


BSSSSS
B


T

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SS
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   4.....10.........20.........30.........40.........50.........60.........70 .........80.
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  ADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVC
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Template Sequence  AKAGATSIVFHPEASEH. IDRSLQLIKSFGIQ. . . . AGLALNPATGIDCLKYV. . . . . . ESNIDRVLIMSVNPGFQKFIP
Template Known Secondary structure  T
S
GGG
S
.TTTS....
TT

SGGGTTT......GGG
S
S
TT




T
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   82.......90........ .100.........110.. .......120......... 130.........140.........150
 
   169170.. .......180.........190.........200.........210.........220.........230.........240...
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Query Sequence  SAQE. AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQR
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Template Sequence  AMLDKAKEISKWISSTDRDIL. . . . . . . LEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNK
Template Known Secondary structure  TTS

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TTTTTT

STSS
T
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   153......160.........170... ......180.........190.........200.........210.........220.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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