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Job DescriptionP08244
Confidence100.00%DateThu Jan 5 11:01:00 GMT 2012
Rank24Aligned Residues201
% Identity18%Templatec3exsB_
PDB info PDB header:lyaseChain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60... ......70.........80.........90
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Query Sequence  TNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQ. . RGFDIFLDLKFHDIPNTAAHAVAAAAD
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Template Sequence  QLPNLQVALDHSNLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAG. . . GTVAKNNAV
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SSGGG
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   4.....10.........20.........30.........40.........50.........60.........70. ........80
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  LGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA
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Template Sequence  RGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW. . . . . . . . . . . . . . . . . . TYDQAQQWLDAGISQAIYHQ
Template Known Secondary structure  TT
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TTT


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   81........90.........100.........110.........120.. .......130.........140..
 
   171 ........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  Q. . . . . . EAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRS
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Template Sequence  SRTWGEKDLNKVKKLIEMGFRV. . . . . . . . . . SVTGGLSVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKRI
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   143......150.........160.... .....170.........180.........190.........200.........210..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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