Return to main results Retrieve Phyre Job Id

Job DescriptionP08244
Confidence100.00%DateThu Jan 5 11:01:00 GMT 2012
Rank5Aligned Residues210
% Identity40%Templatec2yytA_
PDB info PDB header:lyaseChain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWM
Query Conservation   
 



       
         
  

 
  
    
   
  
 
    
  
 
  


 
           


 
Alig confidence 















































































Template Conservation 






      

 
       
  

 
  

   
   
  
      
  
 
  


 
           


 
Template Sequence  PFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELYYQEGPAIVAFLKEQGHAVFLDLKLHDIPNTVKQAMKGLARVGADL
Template Known Secondary structure 



SSGGGGGS

TTT

S
T
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   96...100.........110.........120. ........130.........140 .........150.........160.........170.
Predicted Secondary structure 







...





.









Query SS confidence 

























. . .


















.






























Query Sequence  VNVHASGGARMMTAAREALVPFGKDA. . . PLLIAVTVLTSMEASDLVD. LGMTLSPADYAERLAALTQKCGLDGVVCSAQ
Query Conservation 



  

  

      
   
   ...   
 
   

        .          
          
  
 
    
Alig confidence 

























...


















.






























Template Conservation 



   
   
                    
 
  


                   
   
      
  
 
    
Template Sequence  VNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSAN
Template Known Secondary structure  GGG
TS
TTS


SS
TT

TT


S
T



GG
Template Predicted Secondary structure 


























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   172.......180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 
































Query SS confidence 





































































Query Sequence  EAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASL
Query Conservation       
         
 


       


    
       


 




 
  
 

  

      
Alig confidence 








................












































Template Conservation      

   ................   


   
   
   


 






  
 

  

  
 
  
Template Sequence  EAAFIKERC. . . . . . . . . . . . . . . . GASFLAVTVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQHEW
Template Known Secondary structure  G................
TTS


TT
SB
T
SS
Template Predicted Secondary structure  ................

















Template SS confidence 





































































   166...170.... .....180.........190.........200.........210.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions