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Job DescriptionP08244
Confidence76.99%DateThu Jan 5 11:01:00 GMT 2012
Rank199Aligned Residues174
% Identity11%Templatec2cw6B_
PDB info PDB header:lyaseChain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30........ .40.........50... ......60.........70.........80.........90.....
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Query Sequence  YHNRDDALAFVDKIDP. RDCRLKVGKEMFTLF. . . . . . GPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWM
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Template Sequence  IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPN. . . . . . LKGFEAAVAAGAKE
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TT
S




TTT
GGGTTS


TT
B



S......TT
S
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   50.........60.........70.........80.........90.........100......... 110.........120...
 
   96...100.... .....110.........120.........130.........140.........150.........160
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Query Sequence  VNVHASGGA. . . . . . . . . . . . . . . RMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQK
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Template Sequence  VVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVR. . GYVSCALGCPYEGKIS. . . . . . . PAKVAEVTKKFYS
Template Known Secondary structure  S
TSS
TTTTT
..STT
BTTTBS

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   124.....130.........140.........150.........160..... ....170.........180. ........190....
 
   161........170. ........180.........190.........200.........210........
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Query Sequence  CGLDGVVCSAQ. . . . . . . . . . . EAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYM
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Template Sequence  MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAV. . . . . . . HCHDTYGQALANTLMALQMGVSVV
Template Known Secondary structure  TT
STT



S
GGG.......B
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   195....200.........210.........220.........230.. .......240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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