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Job DescriptionP08244
Confidence95.73%DateThu Jan 5 11:01:00 GMT 2012
Rank121Aligned Residues180
% Identity14%Templatec1gehE_
PDB info PDB header:lyaseChain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PQFVRELQQ. RGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG. GARMMTAAREALVPFGKDAPLLIAVTVLTS
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Template Sequence  AKIIDKVENETGEKKTWFANITADLLEMEQRLEVLADLGLKHAMVDVVITGWGALRYIRDLAADYG. . . . . . LAIHGHRA
Template Known Secondary structure  T
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   210.........220.........230.........240.........250.........260.........270..... ....280...
 
   133......140.........150.........160.........170. ........180 .........190......
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Query Sequence  MEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQ. . . . . . . . . EAVRFKQVF. . . . . . . GQEFKLVTPGIRPQGS
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Template Sequence  MHAAFTRNPYHGIS. MFVLAKLYRLI. . . GIDQLHVGTAEGGKWDVIQNARILRESHYKPDENDVFHLEQKFYSIKAAFP
Template Known Secondary structure  TTS
TTS
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   284.....290....... ..300........ .310.........320.........330.........340.........350.........
 
   197..200.........210.. .......220 .........230... ......240....
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Query Sequence  EAGDQRRIMTPEQALS. AGVDYMVI. GRPVTQSVDPAQT. LKAINASLQRS
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Template Sequence  TSSGGLHPGNIQPVIEALGTDIVLQLGGGTLGHPDGPAAGARAVRQAIDAI
Template Known Secondary structure  SS

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   365....370.........380.........390.........400.........410.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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