Job Description P76361 Confidence 23.96% Date Thu Jan 5 12:22:20 GMT 2012 Rank 17 Aligned Residues 40 % Identity 38% Template c3o37D_ PDB info PDB header:transcription/protein binding Chain: D: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal structure of trim24 phd-bromo complexed with h3(1-10)k42 peptide Resolution 2.00 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		N	D	D	F	L	D	R	C	L	D	G	G	D	W	Y	P	F	S	E	G	R	R	F	V	S	F	H	H	V	D	E	L	R	I	C	A	S	C	G	L	T	.	.	.	E	V	H	H	A	P	E	N	H	K	P	D	P	E	W	Y	C
Query Conservation																																											.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	D	W	C	A	V	C	Q	N	G	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	C	C	E	K	C	P	K	V	F	H	L	S	C	H	V	P	T	L	T	N	F	P	S	G	E	W	I	C
Template Known Secondary structure				S	S		T	T	T				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S					T	T	T	S	S	S			S	S			S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.																			.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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