 |
Job Description | P76361 | Confidence | 13.72% | Date | Thu Jan 5 12:22:20 GMT 2012 |
Rank | 37 | Aligned Residues | 38 |
% Identity | 21% | Template | c2f6nA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:bromodomain phd finger transcription factor; |
PDBTitle: crystal structure of phd finger-linker-bromodomain fragment2 of human bptf in the free form
|
Resolution | 2.00 Å |
|
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | |
|
|
|
. | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  | . | . | . | . |  |  |  |  |  |
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | E | L | R | I | C | A | S | C | G | L | . |
. |
. |
. |
T | E | V | H | H | A | P | E | N | H | K | P | D | P | E | W | Y | C | S | S | L | C | R | E | T | E | T |
Query Conservation |   |
  |
|
|
|   |
|
|
|
|
|
|   | . | . | . | . |
|   |
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |
|   |   |   |   |   |
Template Sequence |   |
S | K | F | Y | I | G | C | D | R | C | Q | N | W | Y | H | G | R | C | V | G | I | L | Q | S | E | A | E | L | I | D | E | Y | V | C | . |
P | Q | C | Q | S | T | E | D |
Template Known Secondary structure |   |
T | S |
|  |  |  |
| T | T | T |
|
|  |  |  | T | G | G | G | T |
|
|  |  |  |  |  | T |
| S |
|
|
|
| . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |
| . |
|  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|