 |
Job Description | P31979 | Confidence | 12.14% | Date | Thu Jan 5 11:48:55 GMT 2012 |
Rank | 60 | Aligned Residues | 55 |
% Identity | 27% | Template | c3ogrA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:beta-galactosidase; |
PDBTitle: complex structure of beta-galactosidase from trichoderma reesei with2 galactose
|
Resolution | 1.50 Å |
|
 |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | M | L | I | S | A | F | A | L | K | A | Y | R | G | Y | I | F | L | R | G | E | Y | I | E | A | A | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | L | R | R | A | I | A | E | A | T | E | A | G | L | L | G | K | N | I | M | G | T | G | F | D | F | E | L | F | V | H | T | G | A | G | R | Y | I | C | G | E |
Query Conservation |   |
|
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|
|   |
|   |
|   |
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
L | D | V | F | H | K | I | K | A | L | G | F | N | T | V | S | F | Y | V | D | W | A | L | L | E | G | K | P | G | R | F | R | A | D | G | I | F | S | L | E | P | F | F | E | A | A | T | K | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | Y | L | L | A | R | P | G | P | Y | I | N | A | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|  |  |  |  |
| S | B | T | T | B |
|
|
|
| G | G | G |
| S |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  | S |
|
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|