Job Description P07004 Confidence 100.00% Date Thu Jan 5 10:59:56 GMT 2012 Rank 7 Aligned Residues 390 % Identity 17% Template c3qanB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1-pyrroline-5-carboxylate dehydrogenase 1; PDBTitle: crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from2 bacillus halodurans Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	M	G	I	A	A	K	Q	A	S	Y	K	L	A	Q	L	S	S	R	E	K	N	R	V	L	E	K	I	A	D	E	L	E	A	Q	S	E	I	I	L	N	A	N	A	Q	D	V	A	D	A	R	A	N	G	L	S	E	A	M	L	D	R	L	A	L	T	P	A	R	L	K	G	I	A	D	D	V	R
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	K	A	I	Q	S	A	D	E	A	F	Q	T	W	R	N	V	N	P	E	E	R	A	N	I	L	V	K	A	A	A	I	I	R	R	R	K	H	E	F	S	A	W	L	V	H	E	A	G	K	P	W	K	E	A	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	T	A	E	A	I	D	F	L	E
Template Known Secondary structure																	T	T	S																			T																							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.													.	.	.	.	.	.	140	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		Q	V	C	N	L	A	D	P	V	G	Q	V	I	D	G	G	V	L	D	S	G	L	R	L	E	R	R	R	V	P	L	G	V	I	G	V	I	Y	E	A	R	P	N	V	T	V	D	V	A	.	.	S	L	C	L	K	T	G	N	A	V	I	L	R	G	G	K	E	T	C	R	T	N	A	A	T	V	A	V	I
Query Conservation																																																			.	.
Alig confidence													.																																						.	.
Template Conservation													.
Template Sequence		Y	Y	A	R	Q	M	I	E	L	N	R	.	G	K	E	I	L	S	R	P	G	E	Q	N	R	Y	F	Y	T	P	M	G	V	T	V	T	I	S	P	W	N	F	A	L	A	I	M	V	G	T	A	V	A	P	I	V	T	G	N	T	V	V	L	K	P	A	S	T	T	P	V	V	A	A	K	F	V	E	V	L
Template Known Secondary structure											T	T	.		B						T	T																			S	T	T	T	T													T	T									T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.										.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	A	L	K	S	C	G	L	P	A	G	A	V	Q	A	I	D	N	P	D	R	A	L	V	S	E	M	L	R	M	D	K	Y	I	D	M	L	I	P	R	G	G	A	G	L	H	K	L	C	R	E	Q	S	T	.	.	.	.	.	.	.	.	.	I	P	V	I	T	G	G	I	G	V	C	H	I	Y	V	D
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																								.																									.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																								.
Template Sequence		E	D	A	.	.	.	.	G	L	P	K	G	V	I	N	Y	V	P	G	S	G	A	E	V	G	D	Y	L	V	D	.	H	P	K	T	S	L	I	T	F	T	G	S	K	D	V	G	V	R	L	Y	E	R	A	A	V	V	R	P	G	Q	N	H	L	K	R	V	I	V	E	M	G	G	K	D	T	V	V	V	D
Template Known Secondary structure					.	.	.	.	T			T	T	S								T	T	T	T							.		T	T								S														S			T	T			S
Template Predicted Secondary structure					.	.	.	.																								.
Template SS confidence
		222	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																			.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	V	E	I	A	E	A	L	K	V	I	V	N	A	K	T	.	Q	R	P	S	T	C	N	T	V	E	T	L	L	V	N	K	N	I	A	D	S	F	L	P	A	L	S	K	Q	M	A	E	S	G	V	T	L	H	A	D	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	A	D	L	D	L	A	A	E	S	I	L	V	S	A	F	G	F	S	G	Q	K	C	S	A	G	S	R	A	V	I	H	K	D	V	Y	D	E	V	L	E	K	T	V	A	L	A	K	N	L	T	V	G	D	P	T	N	R	D	N	Y	M	G	P	V	I	D	E	K	A	F	E	K	I	M	S	Y	I	E
Template Known Secondary structure		T	T	S															G	G	G	G		S	T	T									T	T	T													T	T			B	S		T	T	S	T	T		S	B				S	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
																				291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	Q	L	Q	A	G	P	A	K	V	V	A	V	K	A	E	E	Y	D	D	E	F	L	S	L	D	L	N	V	K	I	V	S	D	L	D	D	A	I	A	H	I	R	E	H	G	T	Q	H	S	D	A	I	L	T	R	D	M	R	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	K	K	E	G	R	L	M	T	G	G	E	G	D	S	S	T	G	F	F	I	Q	P	T	I	I	A	D	L	D	P	E	A	V	I	M	Q	E	E	I	F	G	P	V	V	A	F	S	K	A	N	D	F	D	H	A	L	E	I	A	N	N	T	E	Y	G	L	T	G	A	V	I	T	R	N	R	A	H	I
Template Known Secondary structure					T	T	S											S	S	S										S			T	T	S	G	G	G	T	S				S	S								S	S									T		S	S			S							S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	F	V	N	E	V	D	S	S	A	V	Y	V	N	A	S	T	R	F	T	D	G	G	Q	F	G	L	G	A	E	V	A	V	S	T	Q	K	L	H	A	R	G	P	M	G	L	E	A	L	T	T	Y	K	W	I	G	I
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		E	Q	A	K	R	E	F	H	V	G	N	L	Y	F	N	R	N	C	T	G	A	I	V	G	Y	H	P	F	G	G	F	K	M	S	G	T	D	S	.	K	A	G	G	P	D	Y	L	A	L	H	M	Q	A	K	T	V	S	E
Template Known Secondary structure								S			S					S	S		S					T	T	T	S		B					T	T	B	S			.		B	T	S	T	T	T	G	G	G	G
Template Predicted Secondary structure																																								.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.