Job Description P07004 Confidence 24.30% Date Thu Jan 5 10:59:56 GMT 2012 Rank 63 Aligned Residues 226 % Identity 16% Template c3e5bB_ PDB info PDB header:lyase Chain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis Resolution 2.37 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.
Predicted Secondary structure															.	.																																																											.	.	.
Query SS confidence															.	.																																																											.	.	.
Query Sequence		E	A	R	P	N	V	T	V	D	V	A	S	L	.	.	C	L	K	T	G	N	A	V	I	L	R	G	G	K	E	T	C	R	T	N	A	A	T	V	A	V	I	Q	D	A	L	K	S	C	G	L	P	A	G	A	V	Q	A	I	D	N	P	D	R	A	L	V	S	E	M	L	R	M	.	.	.	D	K	Y	I
Query Conservation															.	.																																																											.	.	.
Alig confidence															.	.																											.	.	.	.	.	.	.	.				.	.	.	.	.																	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.				.	.	.	.	.
Template Sequence		E	I	K	Y	S	L	A	E	M	G	A	N	R	L	W	K	L	I	H	E	E	D	F	V	N	A	L	G	A	L	S	G	N	Q	A	M	Q	M	V	R	A	.	.	.	.	.	.	.	.	G	L	K	.	.	.	.	.	A	I	Y	L	S	G	W	Q	V	A	A	D	A	N	T	A	S	A	M	Y	P	D	Q
Template Known Secondary structure																						S	S						B		S	S										T	.	.	.	.	.	.	.	.	T		S	.	.	.	.	.															T	T		S				S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.				.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.									.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.
Predicted Secondary structure																						.	.	.												.	.	.	.	.	.											.	.																				.	.	.	.	.	.
Query SS confidence																						.	.	.												.	.	.	.	.	.											.	.																				.	.	.	.	.	.
Query Sequence		D	M	L	I	P	R	G	G	A	G	L	H	K	L	C	R	E	Q	S	T	.	.	.	I	P	V	I	T	G	G	I	G	V	C	.	.	.	.	.	.	H	I	Y	V	D	E	S	V	E	I	.	.	A	E	A	L	K	V	I	V	N	A	K	T	Q	R	P	S	T	C	N	.	.	.	.	.	.	T	V	E
Query Conservation																						.	.	.												.	.	.	.	.	.											.	.																				.	.	.	.	.	.
Alig confidence																						.	.	.												.	.	.	.	.	.											.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	Y	P	A	N	A	G	P	E	L	A	K	R	I	N	R	T	L	Q	R	A	D	Q	I	E	T	A	E	G	K	G	L	S	V	D	T	W	F	A	P	I	V	A	D	A	E	A	G	F	G	G	P	L	D	A	F	E	I	M	K	A	Y	I	E	A	G	A	A	G	V	H	F	E	D	Q	L	A	S	G
Template Known Secondary structure		S		S		T	T																								T	S			S	S	S		S									T	T	T	T	S	S															T		S						S	B
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		T	L	L	V	N	K	N	I	A	D	S	F	L	P	A	L	S	K	Q	M	A	E	S	G	V	T	L	H	A	D	A	A	A	L	A	Q	L	Q	A	G	P	A	K	V	V	A	V	K	A	E	E	Y	.	.	D	D	E	F	L	S	L	D	L	N	V	K	I	V	S	D	L	D	D	A	I	A	H	I	R	E
Query Conservation																																																						.	.
Alig confidence																																																						.	.
Template Conservation
Template Sequence		K	V	L	I	P	T	A	A	H	I	R	N	L	N	A	A	R	L	A	A	D	V	M	G	T	P	T	L	I	V	A	R	T	D	A	E	A	A	K	L	L	T	S	D	I	D	E	R	D	Q	P	F	V	D	Y	E	A	G	R	T	A	E	G	F	Y	Q	V	K	N	G	I	E	P	C	I	A	R	A	I	A
Template Known Secondary structure																									T											T	T	T					S				S	T	T	T	G	G	G	B		T	T	S		B		T	T	S				B			S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		336	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		H	G	T	Q	H	S	D	A	I	L	T	R	.	.	.	.	D	M	R	N	A	Q	R	F	V	N	E	V
Query Conservation														.	.	.	.
Alig confidence						.								.	.	.	.
Template Conservation						.
Template Sequence		Y	A	P	Y	.	C	D	L	I	W	M	E	T	S	K	P	D	L	A	Q	A	R	R	F	A	E	A	V
Template Known Secondary structure			G	G	G	.		S							S	S
Template Predicted Secondary structure						.
Template SS confidence
		271	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions