Job Description P07004 Confidence 100.00% Date Thu Jan 5 10:59:56 GMT 2012 Rank 13 Aligned Residues 393 % Identity 17% Template c2ve5H_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystallographic structure of betaine aldehyde2 dehydrogenase from pseudomonas aeruginosa Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	M	G	I	A	A	K	Q	A	S	Y	K	L	A	Q	L	S	S	R	E	K	N	R	V	L	E	K	I	A	D	E	L	E	A	Q	S	E	I	I	L	N	A	N	A	Q	D	V	A	D	A	R	A	N	G	L	S	E	A	M	L	D	R	L	A	L	T	P	A	R	L	K	G	I	A	D	D	V	R
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	R	A	V	Q	S	A	V	E	G	Q	K	V	W	A	A	M	T	A	M	Q	R	S	R	I	L	R	R	A	V	D	I	L	R	E	R	N	D	E	L	A	A	L	E	T	L	D	T	G	K	P	L	A	E	T	R	S	V	D	.	.	.	.	.	.	.	.	.	.	.	I	V	T	G	A	D	V	L	E
Template Known Secondary structure																		T	S																			T																				T	T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.												.	.	.	.	110	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		Q	V	C	N	L	A	D	P	V	G	Q	V	I	D	G	G	V	L	D	S	G	L	R	L	E	R	R	R	V	P	L	G	V	I	G	V	I	Y	E	A	R	P	N	V	T	V	D	V	.	.	A	S	L	C	L	K	T	G	N	A	V	I	L	R	G	G	K	E	T	C	R	T	N	A	A	T	V	A	V	I
Query Conservation																																																		.	.
Alig confidence																		.	.																															.	.
Template Conservation																		.	.
Template Sequence		Y	Y	A	G	L	V	P	A	I	E	G	E	Q	I	P	L	.	.	R	E	T	S	F	V	Y	T	R	R	E	P	L	G	V	V	A	G	I	G	A	W	N	Y	P	V	Q	I	A	L	W	K	S	A	P	A	L	A	A	G	N	A	M	I	F	K	P	S	E	V	T	P	L	T	A	L	K	L	A	E	I	Y
Template Known Secondary structure					T	T	G	G	G									.	.		T	T											S								S	S	S															T	T									S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		Q	D	A	L	K	S	C	G	L	P	A	G	A	V	Q	A	I	D	N	P	D	R	A	L	V	S	E	M	L	R	M	D	K	Y	I	D	M	L	I	P	R	G	G	A	G	L	H	K	L	C	R	E	Q	S	T	.	.	.	.	I	P	V	I	T	G	G	I	G	V	C	H	I	Y	V	D	E	S	V	E	I
Query Conservation																																																									.	.	.	.
Alig confidence					.	.	.	.																								.																									.	.	.	.
Template Conservation					.	.	.	.																								.
Template Sequence		T	E	A	.	.	.	.	G	V	P	D	G	V	F	N	V	L	T	G	S	G	R	E	V	G	Q	W	L	T	E	.	H	P	L	I	E	K	I	S	F	T	G	G	T	S	T	G	K	K	V	M	A	S	A	S	S	S	S	L	K	E	V	T	M	E	L	G	G	K	S	P	L	I	I	F	P	D	A	D	L
Template Known Secondary structure				T	.	.	.	.	T			T	T	T						S		T	T	T								.		T	T								S																																		T	T	S
Template Predicted Secondary structure					.	.	.	.																								.
Template SS confidence
		193	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure														.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	L	K	V	I	V	N	A	K	T	.	Q	R	P	S	T	C	N	T	V	E	T	L	L	V	N	K	N	I	A	D	S	F	L	P	A	L	S	K	Q	M	A	E	S	G	V	T	L	H	A	D	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	A	A	D	I	A	V	M	A	N	F	F	S	S	G	Q	V	C	T	N	G	T	R	V	F	I	H	R	S	Q	Q	A	R	F	E	A	K	V	L	E	R	V	Q	R	I	R	L	G	D	P	Q	D	E	N	T	N	F	G	P	L	V	S	F	P	H	M	E	S	V	L	G	Y	I	E	S	G	K	A	Q
Template Known Secondary structure														G	G	G	G			T	T									G	G	G													T	T			B			T	T	S	T	T		S	B				S																		T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
																				291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	Q	L	Q	A	G	P	A	K	V	V	A	V	K	A	E	E	Y	D	D	E	F	L	S	L	D	L	N	V	K	I	V	S	D	L	D	D	A	I	A	H	I	R	E	H	G	T	Q	H	S	D	A	I	L	T	R	D	M	R	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	R	L	L	C	G	G	E	R	V	T	D	G	A	F	G	K	G	A	Y	V	A	P	T	V	F	T	D	C	R	D	D	M	T	I	V	R	E	E	I	F	G	P	V	M	S	I	L	V	Y	D	D	E	D	E	A	I	R	R	A	N	D	T	E	Y	G	L	A	A	G	V	V	T	Q	D	L	A	R	A
Template Known Secondary structure		T								S				S	G	G	G	G	G	T	T									S			T	T	S					S				S	S								S												S	S			S							S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	F	V	N	E	V	D	S	S	A	V	Y	V	N	A	S	T	R	F	T	D	G	G	Q	F	G	L	G	A	E	V	A	V	S	T	Q	K	L	H	A	R	G	P	M	G	L	E	A	L	T	T	Y	K	W	I	G	I	G	D	Y	T	I	R
Query Conservation
Alig confidence																							.	.																		.	.
Template Conservation																							.	.																		.	.
Template Sequence		H	R	A	I	H	R	L	E	A	G	I	C	W	I	N	T	W	G	E	S	P	.	.	A	E	M	P	V	G	G	Y	K	Q	S	G	V	G	R	E	N	.	.	G	L	T	T	L	A	H	Y	T	R	I	K	S	V	Q	V	E	L	G	D	Y	A
Template Known Secondary structure											S					S							.	.	T	T	S		B			S	G	G	G			S		B	S	.	.							T	T											S
Template Predicted Secondary structure																							.	.																		.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.