Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8F0
Confidence98.78%DateWed Jan 25 15:20:18 GMT 2012
Rank34Aligned Residues115
% Identity17%Templatec3lpnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of the phosphoribosylpyrophosphate (prpp) synthetase2 from thermoplasma volcanium in complex with an atp analog (ampcpp).
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  KKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKK
Query Conservation       
 




  
  
     
 
 

 
   

  
        


  
    


 

 



 
   

  
  
Alig confidence 























....



















































Template Conservation     





 
   

   
  

....       
 
             

 

 







 

 

  

  
  
Template Sequence  DVDYVVSPDDGGLARVADISAKLG. . . . KKHFFIEKKRIDDRTVEMKVPNVDVNGKKLLIVDDIISTGGTIAKSSGLLRE
Template Known Secondary structure 

SSSSSST....
TTS



TT
SS
Template Predicted Secondary structure 








....


















Template SS confidence 















































































   153......160.........170...... ...180.........190.........200.........210.........220........
 
   149150........ .160.........170.........180........
Predicted Secondary structure 



..









Query SS confidence 









. .





























Query Sequence  AGCSSIKVLV. . LVAAPEGIAALEKAHPDVELYTASIDQGLN
Query Conservation   
   
 
  .. 


  

  
    
 
 
 
  

  
 
Alig confidence 









..













.














Template Conservation   

  
    




   
   
   .   

 



     
Template Sequence  KGASKIYVSAVHGLFVNGSENKILQN. ADEIHVTDTVESKFS
Template Known Secondary structure  TT
S


TTTT.
SSSS
STT
Template Predicted Secondary structure 








.








Template SS confidence 









































   229230.........240.........250.... .....260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions