 |
Job Description | P0AD10 | Confidence | 1.71% | Date | Thu Jan 5 11:19:37 GMT 2012 |
Rank | 48 | Aligned Residues | 39 |
% Identity | 15% | Template | c2v6zM_ |
PDB info |
PDB header:transferase | Chain: M: PDB Molecule:dna polymerase epsilon subunit 2; |
PDBTitle: solution structure of amino terminal domain of human dna2 polymerase epsilon subunit b
|
Resolution | UNK |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | Q | E | L | V | S | D | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | C | Q | L | V | I | K | Q | I | L | D | V | L | D | V | I | A | P | V | E | V | R | E | K | M | S | S | Q | L | K |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |
|   |
|   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|
|   |
|   |
|   |   |   | . |   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|   |
Template Sequence |   |
A | P | E | R | L | R | S | R | A | L | S | A | F | K | L | R | G | L | L | L | R | G | E | A | I | K | Y | L | T | E | A | L | Q | S | I | . |
S | E | L | E | L | E | D | K | L | E | K | I | I | N | A | V | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|  |  |  |  |  |  |  |  |  |  | T | T | T | S | . |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|