Job Description P27303 Confidence 99.85% Date Thu Jan 5 11:43:50 GMT 2012 Rank 6 Aligned Residues 221 % Identity 18% Template d1vf7a_ SCOP info HlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins Resolution 2.40

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		48	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		H	F	E	E	T	D	D	A	Y	V	A	G	.	N	Q	I	Q	I	M	S	Q	V	S	G	S	V	T	K	V	W	A	D	N	T	D	F	V	K	E	G	D	V	L	V	T	L	D	P	T	D	A	R	Q	A	F	E	K	A	K	T	A	L	A	S	S	V	R	Q	T	H	Q	L	M	I	N	S	K	Q	L	Q
Query Conservation														.
Alig confidence														.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	N	T	E	L	P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S								S	S									S		S	S					T	T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	I	E	V	Q	K	I	A	L	A	K	A	Q	S	D	Y	N	R	R	V	P	L	G	N	A	N	L	I	G	R	E	E	L	Q	H	A	R	D	A	V	T	S	A	Q	A	Q	L	D	V	A	I	Q	Q	Y	N	A	N	Q	A	M	I	L	G	T	K	L	E	D	Q	P	A	V	Q	Q	A	A	T	E	V
Query Conservation
Alig confidence		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	K	L	L	V	A	D	Q	A	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.																								T	T	S	S																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.														.	.	.	270	.
Predicted Secondary structure																																						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	A	W	L	A	L	E	R	T	R	I	I	S	P	M	T	G	Y	V	S	R	R	A	V	Q	P	G	A	Q	I	S	P	T	T	P	.	.	L	M	A	V	V	P	A	T	N	M	W	V	D	A	N	F	K	E	T	Q	I	A	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	G	Q	P
Query Conservation																																						.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																													.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V	D	V	T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A	A	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T					S	S	S							S	S		T	T					T	T		S	S		S							S																							T	S	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	I	T	T	D	I	Y	G	D	D	V	K	Y	T	G	K	V	V	G	L	D	M	G	T	G	S	A	F	S	L	L	P	A	Q	N	A	T	G	N	W	I	K	V	V	Q	R	L	P	V	R	I	E	L	D	Q	K	Q	L	E	Q	Y	P	L	R	I	G	L	S	T	L	V	S	V	N	T	T
Query Conservation
Alig confidence														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		V	S	L	K	L	E	D	G	S	Q	Y	P	.	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	S	V	T	I	R	A	V	F	P	N	P	N	N	E	.	.	.	L	L	P	G	M	F	V	H	A	Q	L	Q	E	G
Template Known Secondary structure							T	T	S				S	.	S						S	S		S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						B					S	S	S		.	.	.			T	T
Template Predicted Secondary structure														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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