6 d1vf7a_ Probab=99.85   E-value=4.8e-20  Score=161.21  Aligned_columns=221  Identities=18%

Q ss_pred             CCEEEEEEEEEE-EEEEEECCCCCEEEEEECCCCCEECCCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             611443489985-8999855326189999858988830686100115478988777654378999999865455899989
Q batch____        48 HFEETDDAYVAG-NQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQ  126 (390)
Q Consensus        48 ~~~~t~~~~V~~-~~v~v~a~v~G~V~~i~V~eGd~V~kGq~L~~ld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  126 (390)
                      ....+..|.|.+ +.+.|+|+++|+|.+++|++||.|++||+|++||+.++...                          
T Consensus         1 t~t~~~~G~v~p~~~~~v~a~v~G~V~~i~v~~Gd~V~kG~~L~~ld~~~~~~~--------------------------   54 (237)
T d1vf7a_           1 TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEAD--------------------------   54 (237)
T ss_dssp             CCEEEEEEECEESCEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCHHHHHH--------------------------
T ss_pred             CEEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEECCCEEEEECCHHHHHH--------------------------
T ss_conf             935999789960048999731260999997689879436968999807899878--------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999988775421112455432740488876677666543899999999999877678887753233566657679
Q batch____       127 ANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEV  206 (390)
Q Consensus       127 ~~l~~a~~~l~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (390)
                        +..+...+..++..+..........................+............                        
T Consensus        55 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  108 (237)
T d1vf7a_          55 --YQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQARINLR------------------------  108 (237)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------------------------
T ss_conf             --777777677768888886433210000000111110127887642211222100------------------------


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCE--EEEEEECCCEEEEEEECHHHHHCC-------------CCCCE
Q ss_conf             998642001223211122100210102762056420--799998666058998637775204-------------68975
Q batch____       207 RNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTP--LMAVVPATNMWVDANFKETQIANM-------------RIGQP  271 (390)
Q Consensus       207 ~~~~~~~~~~~~~~~~~g~v~~~~~~~g~~v~~~~~--i~~i~~~~~~~v~a~V~~~d~~~i-------------~~Gq~  271 (390)
                              ......+............+..+..+..  ++.+...+.+++.+.+++.++.++             ..|+.
T Consensus       109 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~e~~~~~i~~~~~~~~~~~~~~~~~~  180 (237)
T d1vf7a_         109 --------YTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAK  180 (237)
T ss_dssp             --------TTEEECSSSEEECCCSSCTTCEECTTCSSCSEEEECCSEEECCEEEEHHHHHHHHHHHHHTSSCEEETTEEE
T ss_pred             --------CCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEECCCEEEEEEEECHHHHHHHHCCCCCHHHCCCCCCCCE
T ss_conf             --------001111111012223214566030157614898742631899999629998875313200000023557733


Q ss_pred             EEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf             89999606994389899999842554322234565466641011489999999628885336345673699999950
Q batch____       272 VTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTT  348 (390)
Q Consensus       272 v~i~~da~p~~~~~~G~V~~I~p~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~l~~~~~~~~~L~pGm~v~v~I~~~  348 (390)
                      +.+.++++++.. |.|+|.+|+|..+..                +++|+|++.|+|++..   |+|||+|+++|.+|
T Consensus       181 ~~~~~~~~~~~~-~~g~V~~i~~~~d~~----------------t~~~~v~~~i~n~~~~---L~pGm~v~v~i~~G  237 (237)
T d1vf7a_         181 VSLKLEDGSQYP-LEGRLEFSEVSVDEG----------------TGSVTIRAVFPNPNNE---LLPGMFVHAQLQEG  237 (237)
T ss_dssp             CCEECTTSCEES-SCCEEESSCSCCCSS----------------SSEEEECBEEECSSSC---CCTTCEEEEEEECC
T ss_pred             EEEEECCCCCCE-EEEEEEEEECEECCC----------------CCEEEEEEEEECCCCC---CCCCCEEEEEEECC
T ss_conf             799851799707-989999981233478----------------7559999996279876---78886699999829