Return to main results Retrieve Phyre Job Id

Job DescriptionP0A823
Confidence14.93%DateThu Jan 5 11:06:41 GMT 2012
Rank53Aligned Residues54
% Identity17%Templatec3h43F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: n-terminal domain of the proteasome-activating nucleotidase2 of methanocaldococcus jannaschii
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50........
Predicted Secondary structure 























Query SS confidence 






















































Query Sequence  SPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDN
Query Conservation     
  
 

 
 


   
 
 

     
 





 


 

  


     
Alig confidence 




































.
















Template Conservation    

 

   
 

    




 
  
 
 
 
 

.   



  


   
 
Template Sequence  VPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVN. PDDLAPGKRVCLNQQTL
Template Known Secondary structure  SS


SSSTTS
B
TTS
.GGG

TT

TTT
Template Predicted Secondary structure 













.









Template SS confidence 






















































   8990.........100.........110.........120..... ....130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions