Job Description P0A823 Confidence 72.02% Date Thu Jan 5 11:06:41 GMT 2012 Rank 14 Aligned Residues 47 % Identity 21% Template c2zkql_ PDB info PDB header:ribosomal protein/rna Chain: L: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		17	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure												.																												.	.	.	.	.	.	.	.
Query SS confidence												.																												.	.	.	.	.	.	.	.
Query Sequence		K	R	F	L	A	D	V	I	T	P	.	D	G	R	E	L	T	L	H	C	P	N	T	G	A	M	T	G	C	A	T	P	G	D	T	V	W	Y	.	.	.	.	.	.	.	.	S	T	S	D	N	T	K	R	K	Y	P
Query Conservation												.																												.	.	.	.	.	.	.	.
Alig confidence												.														.														.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		I	R	K	C	V	R	V	Q	L	I	K	N	G	K	K	I	T	A	F	V	P	N	D	G	.	C	L	N	F	I	E	E	N	D	E	V	L	V	A	G	F	G	R	K	G	H	A	V	G	D	I	P	G	V	R	F	K
Template Known Secondary structure											S	G	G	G									S	S		.	S	S					T	T							S	S	S	S	S	S			B	T	T	B	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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