Job Description P0A823 Confidence 10.46% Date Thu Jan 5 11:06:41 GMT 2012 Rank 66 Aligned Residues 53 % Identity 13% Template c2qpqC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protein bug27; PDBTitle: structure of bug27 from bordetella pertussis Resolution 1.92 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	A	E	N	E	Q	G	Y	F	P	D	A	V	T	E	R	G	Q	K	H	L	R	E	L	M	S	V	A	A	E	G	Q	R	A	V	I	F	F	A	V	L	H	S	A	I	T	R	F	S	P	A	R	H	I	D	E	K	Y	A	Q	L	L	S	E	A	Q	Q	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		A	V	T	S	K	E	R	S	A	L	L	P	E	V	P	T	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	Q	G	V	A	G	Y	E	L	N	Q	W	.	.	.	.	.	H	G	L	L	V	P	G	A	T	P	M	A	V	R	Q	K	L	Y	D	G	I	A	K
Template Known Secondary structure				S	S	S	S			T	T		T	T	S		B	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T		T	T							.	.	.	.	.							T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.													.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions