Job Description P39401 Confidence 98.44% Date Thu Jan 5 12:00:36 GMT 2012 Rank 30 Aligned Residues 217 % Identity 18% Template c2x98A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase Resolution 1.70 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		P	D	P	K	L	N	L	V	Y	I	Y	G	E	S	L	E	R	T	Y	F	D	N	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	D	L	T	P	E	L	G	A	L	K	N	E	G	L	D	F	S	H	T	Q	Q	L	.	P	G	T	D	Y	T	I	A	G	M	V	A	S	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		A	S	P	A	A	N	A	I	A	Y	I	V	D	G	M	G	Q	T	Q	I	S	A	A	R	Y	L	N	A	Y	K	T	A	P	E	R	F	P	L	N	V	S	P	A	E	T	P	T	G	F	D	A	F	S	S	R	G	S	M	T	T	F	P	D	D	P	Y	E	T	T	T	D	S	A	A	A	A	T	A	F	A
Template Known Secondary structure				S		S																												T	T	T	T	T	G	G	G	S	T	T	T	S			T	G	G	G	S	S												S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	I	P	L	F	A	P	F	E	G	N	A	S	A	S	V	S	S	F	F	P	Q	N	I	C	L	G	D	I	L	K	N	S	G	Y	Q	N	Y	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		S	G	V	.	K	T	Y	N	G	A	I	G	G	V	Q	T	S	G	G	G	F	Q	R	V	D	T	V	L	E	R	A	S	A	Q	G	Y	A	T	G	L	I	T	T	T	E	A	T	H	A	T	P	A	A	F	A	A	H	V	E	D	R	G	N	Q	T	E	I	A	R	Q	Y	I	E	E	T	Q	P	D	V	I
Template Known Secondary structure			S		.				T	T		B	S					T	T	T																T											T	T	S										B	S	S	T	T												T	T			S
Template Predicted Secondary structure					.
Template SS confidence
		124	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
				262	.	.	.	.	.	.								.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.								.	.	.	.	.	300	.	.	.	.	.	.												.	.	.	310	.	.	.	.
Predicted Secondary structure		.	.								.	.	.	.	.	.	.																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.								.	.	.	.	.	.	.																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	A	N	L	R	F	A	.	.	.	.	.	.	.	G	K	D	V	F	L	K	S	H	G	F	D	H	L	Y	G	S	E	E	L	K	S	V	V	A	D	.	.	.	.	.	.	.	P	H	Y	R	N	D	W	G	F	Y	D	D	.	.	.	.	.	.	.	.	.	.	.	T	V	L	D	E	A	W	K
Query Conservation		.	.								.	.	.	.	.	.	.																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.								.	.	.	.	.	.	.																											.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	G	Q	R	R	D	F	E	A	D	A	S	N	G	G	T	L	V	D	A	A	R	D	N	G	Y	T	I	A	E	T	A	A	E	L	D	A	V	D	D	P	P	V	L	G	L	F	S	Q	E	S	H	L	D	Y	Y	L	D	R	K	N	D	P	E	N	T	Q	P	N	L	D	A	M	V	D	A	G	V	D
Template Known Secondary structure						G	G	G	G	G	S	B		S	S	S	S	B								T	T						S									S	S								S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		K	F	E	E	L	S	R	S	G	Q	R	F	S	L	F	T	L	T	V	D	.	.	.	.	T	H	H	P	D	G	F	I	S	R	T	C	N	R	K	K	Y	D	F	D	G	K	P	N	Q	S	F	S	A	V	S	C	S	Q	E	N	I	A	T	F	I	N	K	I	K	A	S	P	W	F	K	D	T	V	I	V
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																	.	.
Template Sequence		L	L	S	S	A	G	D	P	D	K	G	F	F	L	L	V	E	S	G	R	V	D	H	A	G	H	A	N	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	V	A	E	Q	Y	E	.	A	T	Q	V	A	G	Q	L	V	E	Y	A	E	T	T	A	.	.	E	P	T	F	L	V
Template Known Secondary structure						S	S		S	S											S								T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								.																S	.	.	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.																		.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.
		391	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	S	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	G	D	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions